While morphologic
characteristics provide valuable criteria for determination of malaria parasite species,
they occasionally fail to differentiate between species that share morphologic
characteristics (especially Plasmodium vivax and P. ovale) or in cases
where parasite morphology has been altered by drug treatment or improper storage of the
sample. In such cases, molecular diagnostic tests can provide useful complementary
information. In addition, molecular tests can be more sensitive and their
interpretation is less open to subjectivity than microscopy. The method currently
used at CDC is described below.
Species-specific
PCR diagnosis of malaria
Plasmodium genomic
DNA is extracted from 200 µl whole blood using the QIAamp Blood Kit (Cat.
No. 29106; Qiagen Inc., Chatsworth, CA.) or a similar product that can
yield the comparable concentration of genomic DNA from the same volume
of blood.
Detection and
speciation of Plasmodium is done with a two step nested PCR using
the primers of Snounou et al. In the first step (PCR1), 1 µl of
extracted DNA is amplified using genus specific primers; in the second
step (PCR2), 1 µl of PCR1 amplification product is further amplified using
species specific primers. Ten µl of each PCR2 amplified DNA product
is separated by 2% agarose gel electrophoresis, stained for 15 min with
ethidium bromide and visualized by UV illumination.
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A:
Agarose gel (2%) analysis of a PCR diagnostic
test for species-specific detection of Plasmodium DNA. PCR was performed using nested primers
of Snounou et al.1
- Lane S: Molecular base
pair standard (50-bp ladder). Black arrows show the size of standard bands.
- Lane 1:
The red arrow shows the diagnostic band for P. vivax (size: 120
bp).
- Lane 2: The red arrow shows the diagnostic band for
P. malariae (size: 144
bp).
- Lane 3: The red arrow shows the diagnostic band for
P. falciparum
(size: 205 bp).
- Lane 4: The red arrow shows the diagnostic band for
P. ovale (size: 800 bp).
Reference:
Snounou G, Viriyakosol S, Zhu XP, et al. High sensitivity detection of human malaria
parasites by the use of nested polymerase chain reaction. Mol Biochem Parasitol 1993;61:315-320.
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